Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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- Structural variants
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ID History
- Gene history

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Gene: Fhip1a MGP_PahariEiJ_G0026564

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Description

FHF complex subunit HOOK interacting protein 1A [Source:MGI Symbol;Acc:MGI:2444746]

Location

Chromosome 4: 76,232,362-76,390,513 reverse strand.

PAHARI_EIJ_v1.1:LT608287.1

About this gene

This gene has 4 transcripts (splice variants), 274 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0069170.1	Fhip1a-202	4514	1079aa	MGP_PahariEiJ_P0069170	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0069172.1	Fhip1a-204	4260	1079aa	MGP_PahariEiJ_P0069172	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0069171.1	Fhip1a-203	3717	226aa	MGP_PahariEiJ_P0069171	Nonsense mediated decay	-
MGP_PahariEiJ_T0069169.1	Fhip1a-201	3227	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data