Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
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ID History
- Gene history

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Gene: Znfx1 MGP_PahariEiJ_G0026143

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Description

zinc finger, NFX1-type containing 1 [Source:MGI Symbol;Acc:MGI:2138982]

Location

Chromosome 3: 149,317,969-149,345,184 reverse strand.

PAHARI_EIJ_v1.1:LT608290.1

About this gene

This gene has 5 transcripts (splice variants), 211 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0067277.1	Znfx1-201	7198	1908aa	MGP_PahariEiJ_P0067277	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0067278.1	Znfx1-202	4137	1042aa	MGP_PahariEiJ_P0067278	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0067279.1	Znfx1-203	2741	868aa	MGP_PahariEiJ_P0067279	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0067280.1	Znfx1-204	2684	839aa	MGP_PahariEiJ_P0067280	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0067281.1	Znfx1-205	2868	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data