Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Stam MGP_PahariEiJ_G0024648

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Description

signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 [Source:MGI Symbol;Acc:MGI:1329014]

Location

Chromosome 3: 1,940,904-1,992,935 forward strand.

PAHARI_EIJ_v1.1:LT608290.1

About this gene

This gene has 9 transcripts (splice variants), 213 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0060702.1	Stam-201	5105	557aa	MGP_PahariEiJ_P0060702	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0060704.1	Stam-203	4481	462aa	MGP_PahariEiJ_P0060704	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0060706.1	Stam-205	867	233aa	MGP_PahariEiJ_P0060706	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0060705.1	Stam-204	2643	50aa	MGP_PahariEiJ_P0060705	Nonsense mediated decay	-
MGP_PahariEiJ_T0060703.1	Stam-202	621	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0060708.1	Stam-207	398	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0060709.1	Stam-208	652	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0060710.1	Stam-209	622	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0060707.1	Stam-206	498	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data