Summary
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Comparative Genomics
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- GO: Anatomical entity
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Gene: U2surp MGP_PahariEiJ_G0015398

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Description

U2 snRNP-associated SURP domain containing [Source:MGI Symbol;Acc:MGI:1915208]

Location

Chromosome 10: 88,909,892-88,966,772 reverse strand.

PAHARI_EIJ_v1.1:LT608289.1

About this gene

This gene has 9 transcripts (splice variants) and 209 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0024742.1	U2surp-201	7613	1029aa	MGP_PahariEiJ_P0024742	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0024743.1	U2surp-202	3524	985aa	MGP_PahariEiJ_P0024743	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0024747.1	U2surp-206	612	203aa	MGP_PahariEiJ_P0024747	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0024748.1	U2surp-207	231	76aa	MGP_PahariEiJ_P0024748	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0024744.1	U2surp-203	3230	425aa	MGP_PahariEiJ_P0024744	Nonsense mediated decay	-
MGP_PahariEiJ_T0024746.1	U2surp-205	3676	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0024750.1	U2surp-209	2897	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0024749.1	U2surp-208	628	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0024745.1	U2surp-204	3087	1028aa	MGP_PahariEiJ_P0024745	Unknown likely coding	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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