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Gene: Rpl27a MGP_PahariEiJ_G0013521

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Description

ribosomal protein L27A [Source:MGI Symbol;Acc:MGI:1347076]

Location

Chromosome 1: 79,347,820-79,351,283 forward strand.

PAHARI_EIJ_v1.1:LT608296.1

About this gene

This gene has 6 transcripts (splice variants) and 400 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0018287.1	Rpl27a-201	1126	148aa	MGP_PahariEiJ_P0018287	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0018291.1	Rpl27a-205	526	41aa	MGP_PahariEiJ_P0018291	Nonsense mediated decay	-
MGP_PahariEiJ_T0018288.1	Rpl27a-202	1424	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0018290.1	Rpl27a-204	770	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0018292.1	Rpl27a-206	391	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0018289.1	Rpl27a-203	347	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data