Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
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Ontologies
Phenotypes
Genetic Variation
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Gene expression
Pathway
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External references
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ID History
- Gene history

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Gene: Chfr MGP_PahariEiJ_G0024120

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Description

checkpoint with forkhead and ring finger domains [Source:NCBI gene;Acc:110339065]

Location

Chromosome 23: 2,751-37,418 forward strand.

PAHARI_EIJ_v1.1:LT608309.1

About this gene

This gene has 12 transcripts (splice variants) and 200 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0057932.1	Chfr-202	3181	664aa	MGP_PahariEiJ_P0057932	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0057937.1	Chfr-207	3168	663aa	MGP_PahariEiJ_P0057937	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0057935.1	Chfr-205	2636	592aa	MGP_PahariEiJ_P0057935	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0057931.1	Chfr-201	607	51aa	MGP_PahariEiJ_P0057931	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0057940.1	Chfr-210	480	114aa	MGP_PahariEiJ_P0057940	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0057938.1	Chfr-208	3223	49aa	MGP_PahariEiJ_P0057938	Nonsense mediated decay	-
MGP_PahariEiJ_T0057934.1	Chfr-204	2866	50aa	MGP_PahariEiJ_P0057934	Nonsense mediated decay	-
MGP_PahariEiJ_T0057933.1	Chfr-203	1774	49aa	MGP_PahariEiJ_P0057933	Nonsense mediated decay	-
MGP_PahariEiJ_T0057939.1	Chfr-209	714	64aa	MGP_PahariEiJ_P0057939	Nonsense mediated decay	-
MGP_PahariEiJ_T0057936.1	Chfr-206	2139	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0057942.1	Chfr-212	614	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0057941.1	Chfr-211	601	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data