Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Genetic Variation
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- Structural variants
Gene expression
Pathway
Molecular interactions
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External references
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ID History
- Gene history

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Gene: Rps9 MGP_PWKPhJ_G0030329

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Description

ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]

Gene Synonyms

3010033P07Rik, AL022771, AL022885

Location

Chromosome 7: 716,365-719,386 forward strand.

PWK_PhJ_v1:CM004120.1

Reference strain equivalent

About this gene

This gene has 11 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_PWKPhJ_T0080876.1	-	915	194aa	MGP_PWKPhJ_P0080876	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PWKPhJ_T0080872.1	-	1348	139aa	MGP_PWKPhJ_P0080872	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_PWKPhJ_T0080878.1	-	897	136aa	MGP_PWKPhJ_P0080878	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_PWKPhJ_T0080870.1	-	751	194aa	MGP_PWKPhJ_P0080870	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20726	D3YUV6 D3YWH9 D3Z673 F7CJS8 Q6ZWN5 Q9CXW7	-
MGP_PWKPhJ_T0080877.1	-	478	79aa	MGP_PWKPhJ_P0080877	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_PWKPhJ_T0080874.1	-	333	57aa	MGP_PWKPhJ_P0080874	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_PWKPhJ_T0080879.1	-	813	135aa	MGP_PWKPhJ_P0080879	Nonsense mediated decay		-	-
MGP_PWKPhJ_T0080875.1	-	1184	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_PWKPhJ_T0080880.1	-	525	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_PWKPhJ_T0080873.1	-	378	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_PWKPhJ_T0080871.1	-	511	116aa	MGP_PWKPhJ_P0080871	Unknown likely coding		-	-

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Summary

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