Description
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:MGI Symbol;Acc:MGI:99603]
Gene Synonyms
2610209L14Rik, SNF2alpha, Snf2l2, brahma, brm
Location
Chromosome 19: 23,235,922-23,480,886 forward strand.
PWK_PhJ_v1:CM004132.1
Reference strain equivalent
About this gene
This gene has 21 transcripts (splice variants).
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|---|
| MGP_PWKPhJ_T0050826.1 | - | 5819 | 1594aa | MGP_PWKPhJ_P0050826 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, | |
| MGP_PWKPhJ_T0050825.1 | - | 5815 | 1576aa | MGP_PWKPhJ_P0050825 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS29720, CCDS37945 | A0A140LHE2 A0A140LHF4 A0A140LHJ8 A0A140LHL7 A0A140LHP6 A0A140LHZ8 A0A140LI08 A0A140LI12 A0A140LI14 A0A140LID0 A0A140LIK7 A0A140LIM0 A0A140LIQ9 A0A140LIV3 A0A140LJD7 A0A140LJK1 E9QAB8 F2Z4A9 H3BJI1 H3BJK2 H3BJM2 H3BK47 H3BKD2 H3BKJ3 H3BKN5 H3BLH0 H3BLI4 Q9D007 | - |
| MGP_PWKPhJ_T0050829.1 | - | 4557 | 1518aa | MGP_PWKPhJ_P0050829 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_PWKPhJ_T0050840.1 | - | 1836 | 236aa | MGP_PWKPhJ_P0050840 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_PWKPhJ_T0050844.1 | - | 946 | 119aa | MGP_PWKPhJ_P0050844 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_PWKPhJ_T0050837.1 | - | 942 | 254aa | MGP_PWKPhJ_P0050837 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_PWKPhJ_T0050836.1 | - | 929 | 254aa | MGP_PWKPhJ_P0050836 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_PWKPhJ_T0050839.1 | - | 879 | 276aa | MGP_PWKPhJ_P0050839 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_PWKPhJ_T0050841.1 | - | 835 | 235aa | MGP_PWKPhJ_P0050841 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_PWKPhJ_T0050838.1 | - | 788 | 224aa | MGP_PWKPhJ_P0050838 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_PWKPhJ_T0050845.1 | - | 736 | 119aa | MGP_PWKPhJ_P0050845 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_PWKPhJ_T0050831.1 | - | 639 | 171aa | MGP_PWKPhJ_P0050831 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_PWKPhJ_T0050842.1 | - | 494 | 83aa | MGP_PWKPhJ_P0050842 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_PWKPhJ_T0050827.1 | - | 5870 | 1503aa | MGP_PWKPhJ_P0050827 | Nonsense mediated decay | - | - | |
| MGP_PWKPhJ_T0050843.1 | - | 1438 | 113aa | MGP_PWKPhJ_P0050843 | Nonsense mediated decay | - | - | |
| MGP_PWKPhJ_T0050833.1 | - | 1584 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | |
| MGP_PWKPhJ_T0050835.1 | - | 426 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | |
| MGP_PWKPhJ_T0050834.1 | - | 867 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_PWKPhJ_T0050832.1 | - | 660 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_PWKPhJ_T0050828.1 | - | 5967 | 1585aa | MGP_PWKPhJ_P0050828 | Unknown likely coding | - | - | |
| MGP_PWKPhJ_T0050830.1 | - | 3231 | 1032aa | MGP_PWKPhJ_P0050830 | Unknown likely coding | - | - |
