Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
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Ontologies
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Genetic Variation
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- Structural variants
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ID History
- Gene history

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Gene: Alkbh6 MGP_NODShiLtJ_G0031826

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Description

alkB homolog 6 [Source:MGI Symbol;Acc:MGI:2142037]

Gene Synonyms

AI839550, Abh6, C130099A02

Location

Chromosome 7: 30,954,718-30,960,305 forward strand.

NOD_ShiLtJ_v1:CM004140.1

Reference strain equivalent

About this gene

This gene has 11 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_NODShiLtJ_T0082524.1	-	982	238aa	MGP_NODShiLtJ_P0082524	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS21085	D3Z1T0 D6RFR9 Q8K2U2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_NODShiLtJ_T0082525.1	-	730	215aa	MGP_NODShiLtJ_P0082525	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0082526.1	-	822	112aa	MGP_NODShiLtJ_P0082526	Nonsense mediated decay		-	-
MGP_NODShiLtJ_T0082534.1	-	545	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_NODShiLtJ_T0082530.1	-	427	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_NODShiLtJ_T0082529.1	-	1181	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0082527.1	-	1112	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0082533.1	-	901	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0082532.1	-	770	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0082531.1	-	750	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0082528.1	-	479	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Summary

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