Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
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Genetic Variation
- Variant table
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- Structural variants
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ID History
- Gene history

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Gene: Mbd4 MGP_NODShiLtJ_G0030965

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Description

methyl-CpG binding domain protein 4 [Source:MGI Symbol;Acc:MGI:1333850]

Gene Synonyms

Med1

Location

Chromosome 6: 130,444,956-130,457,413 reverse strand.

NOD_ShiLtJ_v1:CM004139.1

Reference strain equivalent

About this gene

This gene has 5 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_NODShiLtJ_T0079140.1	-	3614	554aa	MGP_NODShiLtJ_P0079140	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS39603	A0A0N4SV30 A0A0N4SWA0 A0A0R4J0A8 Q3TU27	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_NODShiLtJ_T0079144.1	-	2421	386aa	MGP_NODShiLtJ_P0079144	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0079143.1	-	670	175aa	MGP_NODShiLtJ_P0079143	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0079142.1	-	2925	365aa	MGP_NODShiLtJ_P0079142	Nonsense mediated decay		-	-
MGP_NODShiLtJ_T0079141.1	-	2064	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-

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Summary

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