Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
Pathway
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Supporting evidence
ID History
- Gene history

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Gene: Pus7 MGP_NODShiLtJ_G0029133

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Description

pseudouridylate synthase 7 [Source:MGI Symbol;Acc:MGI:1925947]

Gene Synonyms

C330017I15Rik

Location

Chromosome 5: 24,395,381-24,446,532 reverse strand.

NOD_ShiLtJ_v1:CM004138.1

Reference strain equivalent

About this gene

This gene has 10 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_NODShiLtJ_T0070045.1	-	3271	666aa	MGP_NODShiLtJ_P0070045	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_NODShiLtJ_T0070046.1	-	3648	660aa	MGP_NODShiLtJ_P0070046	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0070044.1	-	3412	660aa	MGP_NODShiLtJ_P0070044	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS51431, CCDS80219	B7ZNL8 F6XMS4 F7CG42 Q91VU7	-
MGP_NODShiLtJ_T0070049.1	-	888	184aa	MGP_NODShiLtJ_P0070049	Nonsense mediated decay		-	-
MGP_NODShiLtJ_T0070052.1	-	750	175aa	MGP_NODShiLtJ_P0070052	Nonsense mediated decay		-	-
MGP_NODShiLtJ_T0070051.1	-	1104	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_NODShiLtJ_T0070048.1	-	773	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_NODShiLtJ_T0070050.1	-	721	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_NODShiLtJ_T0070053.1	-	2926	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0070047.1	-	2187	666aa	MGP_NODShiLtJ_P0070047	Unknown likely coding		-	-

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Summary

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