Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
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Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Rbm47 MGP_LPJ_G0029487

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Description

RNA binding motif protein 47 [Source:MGI Symbol;Acc:MGI:2384294]

Gene Synonyms

9530077J19Rik

Location

Chromosome 5: 66,213,705-66,384,001 reverse strand.

LP_J_v1:CM004260.1

Reference strain equivalent

About this gene

This gene has 14 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_LPJ_T0071686.1	-	5210	590aa	MGP_LPJ_P0071686	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_LPJ_T0071688.1	-	4894	590aa	MGP_LPJ_P0071688	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0071685.1	-	4702	590aa	MGP_LPJ_P0071685	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19313, CCDS71598	D3YXZ5 D3Z113 D3Z5E3 Q91WT8	-
MGP_LPJ_T0071687.1	-	4642	590aa	MGP_LPJ_P0071687	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0071690.1	-	3179	590aa	MGP_LPJ_P0071690	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0071689.1	-	2972	521aa	MGP_LPJ_P0071689	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0071691.1	-	2187	590aa	MGP_LPJ_P0071691	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0071693.1	-	703	158aa	MGP_LPJ_P0071693	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0071696.1	-	530	6aa	MGP_LPJ_P0071696	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0071695.1	-	332	13aa	MGP_LPJ_P0071695	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0071694.1	-	504	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_LPJ_T0071698.1	-	464	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_LPJ_T0071697.1	-	452	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_LPJ_T0071692.1	-	2398	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Summary

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