Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
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Ontologies
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Genetic Variation
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- Structural variants
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Supporting evidence
ID History
- Gene history

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Gene: Rbm38 MGP_LPJ_G0026886

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Description

RNA binding motif protein 38 [Source:MGI Symbol;Acc:MGI:1889294]

Gene Synonyms

Rnpc1, Seb4, Seb4l

Location

Chromosome 2: 179,202,470-179,215,296 forward strand.

LP_J_v1:CM004257.1

Reference strain equivalent

About this gene

This gene has 6 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_LPJ_T0059400.1	-	714	237aa	MGP_LPJ_P0059400	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_LPJ_T0059402.1	-	440	125aa	MGP_LPJ_P0059402	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0059398.1	-	936	78aa	MGP_LPJ_P0059398	Nonsense mediated decay	CCDS17139	G3UWQ8 G3UWX7 G3UXG4 G3UXN1 Q62176	-
MGP_LPJ_T0059401.1	-	620	107aa	MGP_LPJ_P0059401	Nonsense mediated decay		-	-
MGP_LPJ_T0059399.1	-	2280	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0059403.1	-	1527	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Summary

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