Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Zcchc8 MGP_FVBNJ_G0029846

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Description

zinc finger, CCHC domain containing 8 [Source:MGI Symbol;Acc:MGI:1917900]

Gene Synonyms

5730565F05Rik

Location

Chromosome 5: 121,212,558-121,235,171 reverse strand.

FVB_NJ_v1:CM004078.1

Reference strain equivalent

About this gene

This gene has 9 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_FVBNJ_T0073950.1	-	4350	709aa	MGP_FVBNJ_P0073950	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS80406	A0A0G2JDI6 A0A0G2JDW3 A0A0G2JFE4 A0A0G2JGW3 A0A0G2JH09 Q9CYA6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_FVBNJ_T0073951.1	-	4286	709aa	MGP_FVBNJ_P0073951	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0073955.1	-	531	102aa	MGP_FVBNJ_P0073955	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0073958.1	-	321	107aa	MGP_FVBNJ_P0073958	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0073953.1	-	751	104aa	MGP_FVBNJ_P0073953	Nonsense mediated decay		-	-
MGP_FVBNJ_T0073956.1	-	690	172aa	MGP_FVBNJ_P0073956	Nonsense mediated decay		-	-
MGP_FVBNJ_T0073957.1	-	506	53aa	MGP_FVBNJ_P0073957	Nonsense mediated decay		-	-
MGP_FVBNJ_T0073952.1	-	1868	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0073954.1	-	738	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Summary

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