Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Genetic Variation
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- Structural variants
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Pathway
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Supporting evidence
ID History
- Gene history

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Gene: Srsf5 MGP_CBAJ_G0019609

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Description

serine/arginine-rich splicing factor 5 [Source:MGI Symbol;Acc:MGI:98287]

Gene Synonyms

Hrs, Sfrs5

Location

Chromosome 12: 86,999,786-87,010,867 forward strand.

CBA_J_v1:CM004025.1

Reference strain equivalent

About this gene

This gene has 12 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_CBAJ_T0034856.1	-	1510	269aa	MGP_CBAJ_P0034856	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CBAJ_T0034864.1	-	1568	268aa	MGP_CBAJ_P0034864	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CBAJ_T0034854.1	-	1527	268aa	MGP_CBAJ_P0034854	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36484	O35326 Q9D8S5 S4R2G3	-
MGP_CBAJ_T0034858.1	-	1498	269aa	MGP_CBAJ_P0034858	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CBAJ_T0034859.1	-	1491	268aa	MGP_CBAJ_P0034859	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CBAJ_T0034862.1	-	547	46aa	MGP_CBAJ_P0034862	Nonsense mediated decay		-	-
MGP_CBAJ_T0034861.1	-	886	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_CBAJ_T0034860.1	-	538	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_CBAJ_T0034863.1	-	490	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_CBAJ_T0034865.1	-	3483	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CBAJ_T0034855.1	-	2940	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CBAJ_T0034857.1	-	2720	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Summary

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