Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
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ID History
- Gene history

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Gene: Alyref MGP_CBAJ_G0019232

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Description

Aly/REF export factor [Source:MGI Symbol;Acc:MGI:1341044]

Gene Synonyms

ALY, Aly, REF1, Ref1, Refbp1, THOC4, Thoc4

Location

Chromosome 11: 133,888,550-133,894,794 reverse strand.

CBA_J_v1:CM004024.1

Reference strain equivalent

About this gene

This gene has 3 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_CBAJ_T0033728.1	-	3527	255aa	MGP_CBAJ_P0033728	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS25744	O08583	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CBAJ_T0033729.1	-	648	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_CBAJ_T0033730.1	-	711	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Summary

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