Description
polypyrimidine tract binding protein 1 [Source:MGI Symbol;Acc:MGI:97791]
Gene Synonyms
AA407203, AL033359, HNRPI, PTB-1, PTB2, PTB3, PTB4, Ptb, hnRNP I, pPTB
Location
Chromosome 10: 86,410,948-86,423,881 forward strand.
CBA_J_v1:CM004023.1
Reference strain equivalent
About this gene
This gene has 17 transcripts (splice variants).
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|---|
| MGP_CBAJ_T0025760.1 | - | 3109 | 555aa | MGP_CBAJ_P0025760 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS35969, CCDS35970, CCDS70064 | E9PZ39 E9Q0W3 E9Q279 E9QMW9 F7AXP1 F7DCW4 Q8BGJ5 Q8CB58 Q922I7 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, |
| MGP_CBAJ_T0025762.1 | - | 3179 | 529aa | MGP_CBAJ_P0025762 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CBAJ_T0025769.1 | - | 2597 | 489aa | MGP_CBAJ_P0025769 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CBAJ_T0025766.1 | - | 389 | 113aa | MGP_CBAJ_P0025766 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CBAJ_T0025771.1 | - | 375 | 55aa | MGP_CBAJ_P0025771 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CBAJ_T0025772.1 | - | 319 | 106aa | MGP_CBAJ_P0025772 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CBAJ_T0025765.1 | - | 1765 | 353aa | MGP_CBAJ_P0025765 | Nonsense mediated decay | - | - | |
| MGP_CBAJ_T0025774.1 | - | 848 | 162aa | MGP_CBAJ_P0025774 | Nonsense mediated decay | - | - | |
| MGP_CBAJ_T0025768.1 | - | 385 | 62aa | MGP_CBAJ_P0025768 | Nonsense mediated decay | - | - | |
| MGP_CBAJ_T0025764.1 | - | 657 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | |
| MGP_CBAJ_T0025767.1 | - | 369 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | |
| MGP_CBAJ_T0025763.1 | - | 2368 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_CBAJ_T0025777.1 | - | 2107 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_CBAJ_T0025761.1 | - | 950 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_CBAJ_T0025773.1 | - | 744 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_CBAJ_T0025776.1 | - | 693 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_CBAJ_T0025770.1 | - | 1668 | 555aa | MGP_CBAJ_P0025770 | Unknown likely coding | - | - |
