Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
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ID History
- Gene history

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Gene: Neil3 MGP_CASTEiJ_G0032623

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Description

nei like 3 (E. coli) [Source:MGI Symbol;Acc:MGI:2384588]

Gene Synonyms

AI449477, BC034753, C85903

Location

Chromosome 8: 52,700,883-52,753,422 reverse strand.

CAST_EiJ_v1:CM004001.1

Reference strain equivalent

About this gene

This gene has 6 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_CASTEiJ_T0088987.1	-	2265	610aa	MGP_CASTEiJ_P0088987	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS22305	D3Z1T7 Q8K203	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CASTEiJ_T0088989.1	-	795	242aa	MGP_CASTEiJ_P0088989	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0088990.1	-	795	201aa	MGP_CASTEiJ_P0088990	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0088992.1	-	373	49aa	MGP_CASTEiJ_P0088992	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0088988.1	-	826	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_CASTEiJ_T0088991.1	-	3088	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Summary

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