Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
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Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Ybx3 MGP_CASTEiJ_G0030446

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Description

Y box protein 3 [Source:MGI Symbol;Acc:MGI:2137670]

Gene Synonyms

Csda, Dpba, MSY3, MSY4, Msy4, Yb2, dbpA, oxyR

Location

Chromosome 6: 133,836,259-133,861,890 reverse strand.

CAST_EiJ_v1:CM003999.1

Reference strain equivalent

About this gene

This gene has 5 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_CASTEiJ_T0080704.1	-	1853	361aa	MGP_CASTEiJ_P0080704	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CASTEiJ_T0080703.1	-	1684	292aa	MGP_CASTEiJ_P0080703	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20605, CCDS20606	Q9JKB3	-
MGP_CASTEiJ_T0080705.1	-	837	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_CASTEiJ_T0080707.1	-	744	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_CASTEiJ_T0080706.1	-	1035	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Summary

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