Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Mbd4 MGP_CASTEiJ_G0030244

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Description

methyl-CpG binding domain protein 4 [Source:MGI Symbol;Acc:MGI:1333850]

Gene Synonyms

Med1

Location

Chromosome 6: 117,368,187-117,380,937 reverse strand.

CAST_EiJ_v1:CM003999.1

Reference strain equivalent

About this gene

This gene has 5 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_CASTEiJ_T0079725.1	-	3606	554aa	MGP_CASTEiJ_P0079725	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS39603	A0A0N4SV30 A0A0N4SWA0 A0A0R4J0A8 Q3TU27	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CASTEiJ_T0079729.1	-	2415	386aa	MGP_CASTEiJ_P0079729	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0079728.1	-	670	175aa	MGP_CASTEiJ_P0079728	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0079727.1	-	2925	365aa	MGP_CASTEiJ_P0079727	Nonsense mediated decay		-	-
MGP_CASTEiJ_T0079726.1	-	2056	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-

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Summary

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