Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Gene: Snrnp200 MGP_CASTEiJ_G0025632

Description

small nuclear ribonucleoprotein 200 (U5) [Source:MGI Symbol;Acc:MGI:2444401]

Gene Synonyms

A330064G03Rik, Ascc3l1, BC011390, HELIC2, Kiaa0788, U5-200-KD, U5-200KD

Location

CAST_EiJ_v1:CM003995.1

Reference strain equivalent

About this gene

This gene has 6 transcripts (splice variants).

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
MGP_CASTEiJ_T0057372.1	-	6745	2136aa	MGP_CASTEiJ_P0057372	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CASTEiJ_T0057374.1	-	593	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-
MGP_CASTEiJ_T0057371.1	-	2896	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	CCDS16695	-
MGP_CASTEiJ_T0057376.1	-	741	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-
MGP_CASTEiJ_T0057375.1	-	722	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-
MGP_CASTEiJ_T0057373.1	-	5241	1650aa	MGP_CASTEiJ_P0057373	Unknown likely coding		-

Summary