Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
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Ontologies
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Genetic Variation
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- Gene history

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Gene: Rbm17 MGP_CASTEiJ_G0024540

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Description

RNA binding motif protein 17 [Source:MGI Symbol;Acc:MGI:1924188]

Gene Synonyms

2700027J02Rik, Spf45

Location

Chromosome 2: 8,872,360-8,892,585 reverse strand.

CAST_EiJ_v1:CM003995.1

Reference strain equivalent

About this gene

This gene has 6 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_CASTEiJ_T0052391.1	-	1599	405aa	MGP_CASTEiJ_P0052391	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS15684	A2AP40 Q8JZX4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CASTEiJ_T0052396.1	-	517	118aa	MGP_CASTEiJ_P0052396	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0052393.1	-	663	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0052394.1	-	458	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0052392.1	-	447	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0052395.1	-	347	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Summary

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