Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
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Supporting evidence
ID History
- Gene history

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Gene: Mbd2 MGP_CASTEiJ_G0023753

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Description

methyl-CpG binding domain protein 2 [Source:MGI Symbol;Acc:MGI:1333813]

Gene Synonyms

MBD2a

Location

Chromosome 18: 70,151,032-70,214,087 forward strand.

CAST_EiJ_v1:CM004011.1

Reference strain equivalent

About this gene

This gene has 6 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_CASTEiJ_T0049853.1	-	1953	414aa	MGP_CASTEiJ_P0049853	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29335, CCDS79661	F6UPR7 Q9Z2E1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CASTEiJ_T0049854.1	-	1290	249aa	MGP_CASTEiJ_P0049854	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0049856.1	-	693	72aa	MGP_CASTEiJ_P0049856	Nonsense mediated decay		-	-
MGP_CASTEiJ_T0049857.1	-	755	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0049858.1	-	494	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0049855.1	-	966	262aa	MGP_CASTEiJ_P0049855	Unknown likely coding		-	-

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Summary

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