Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Dxo MGP_CASTEiJ_G0022815

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Description

decapping exoribonuclease [Source:MGI Symbol;Acc:MGI:1890444]

Gene Synonyms

Dom3z, NG6

Location

Chromosome 17: 34,661,202-34,663,400 forward strand.

CAST_EiJ_v1:CM004010.1

Reference strain equivalent

About this gene

This gene has 11 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_CASTEiJ_T0046954.1	-	1519	397aa	MGP_CASTEiJ_P0046954	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CASTEiJ_T0046953.1	-	1447	397aa	MGP_CASTEiJ_P0046953	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0046952.1	-	1117	304aa	MGP_CASTEiJ_P0046952	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28660	A0A0R4J288 G3UWP7 G3UWW3 G3UX82 G3UYE6 G3UYP2 G3UZ39 G3UZP8 G3UZV8	-
MGP_CASTEiJ_T0046957.1	-	738	245aa	MGP_CASTEiJ_P0046957	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0046956.1	-	584	144aa	MGP_CASTEiJ_P0046956	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0046961.1	-	583	118aa	MGP_CASTEiJ_P0046961	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0046962.1	-	499	166aa	MGP_CASTEiJ_P0046962	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0046958.1	-	701	45aa	MGP_CASTEiJ_P0046958	Nonsense mediated decay		-	-
MGP_CASTEiJ_T0046960.1	-	480	73aa	MGP_CASTEiJ_P0046960	Nonsense mediated decay		-	-
MGP_CASTEiJ_T0046959.1	-	427	60aa	MGP_CASTEiJ_P0046959	Nonsense mediated decay		-	-
MGP_CASTEiJ_T0046955.1	-	956	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Summary

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