Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Tarbp2 MGP_CASTEiJ_G0021677

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Description

TARBP2, RISC loading complex RNA binding subunit [Source:MGI Symbol;Acc:MGI:103027]

Gene Synonyms

Prbp, TRBP

Location

Chromosome 15: 104,585,809-104,591,287 forward strand.

CAST_EiJ_v1:CM004008.1

Reference strain equivalent

About this gene

This gene has 14 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_CASTEiJ_T0042591.1	-	1523	365aa	MGP_CASTEiJ_P0042591	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CASTEiJ_T0042588.1	-	1278	274aa	MGP_CASTEiJ_P0042588	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0042596.1	-	1081	225aa	MGP_CASTEiJ_P0042596	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0042598.1	-	782	243aa	MGP_CASTEiJ_P0042598	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0042593.1	-	420	56aa	MGP_CASTEiJ_P0042593	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0042590.1	-	370	49aa	MGP_CASTEiJ_P0042590	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0042586.1	-	1817	79aa	MGP_CASTEiJ_P0042586	Nonsense mediated decay	CCDS27886, CCDS57013	D3YUS9 D3YZS5 D3Z033 D3Z282 D6RCY4 D6RE49 P97473 Q3UNH9	-
MGP_CASTEiJ_T0042597.1	-	482	58aa	MGP_CASTEiJ_P0042597	Nonsense mediated decay		-	-
MGP_CASTEiJ_T0042594.1	-	951	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_CASTEiJ_T0042589.1	-	2732	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0042587.1	-	1033	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0042595.1	-	713	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0042599.1	-	707	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0042592.1	-	704	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Summary

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