Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Rpl3 MGP_CASTEiJ_G0021351

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Description

ribosomal protein L3 [Source:MGI Symbol;Acc:MGI:1351605]

Gene Synonyms

F2, J1

Location

Chromosome 15: 80,482,243-80,497,266 reverse strand.

CAST_EiJ_v1:CM004008.1

Reference strain equivalent

About this gene

This gene has 7 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_CASTEiJ_T0041550.1	-	1923	504aa	MGP_CASTEiJ_P0041550	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CASTEiJ_T0041552.1	-	816	188aa	MGP_CASTEiJ_P0041552	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0041551.1	-	820	180aa	MGP_CASTEiJ_P0041551	Nonsense mediated decay		-	-
MGP_CASTEiJ_T0041549.1	-	1852	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0041548.1	-	1751	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0041553.1	-	615	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0041547.1	-	1883	493aa	MGP_CASTEiJ_P0041547	Unknown likely coding	CCDS37144	A0A087WNS0 A0A087WQK0 P27659	-

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Summary

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