Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
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Genetic Variation
- Variant table
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- Structural variants
Gene expression
Pathway
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Regulation
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ID History
- Gene history

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Gene: Zcchc9 MGP_CASTEiJ_G0020072

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Description

zinc finger, CCHC domain containing 9 [Source:MGI Symbol;Acc:MGI:1916335]

Gene Synonyms

1810019C21Rik

Location

Chromosome 13: 91,332,959-91,342,036 reverse strand.

CAST_EiJ_v1:CM004006.1

Reference strain equivalent

About this gene

This gene has 5 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_CASTEiJ_T0037453.1	-	1525	271aa	MGP_CASTEiJ_P0037453	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36742	F7A6K2 Q8R1J3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CASTEiJ_T0037455.1	-	913	108aa	MGP_CASTEiJ_P0037455	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0037454.1	-	3394	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0037456.1	-	931	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0037457.1	-	349	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Summary

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