Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Pcbp3 MGP_CASTEiJ_G0016721

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Description

poly(rC) binding protein 3 [Source:MGI Symbol;Acc:MGI:1890470]

Gene Synonyms

AlphaCP-3

Location

Chromosome 10: 76,771,749-76,985,003 reverse strand.

CAST_EiJ_v1:CM004003.1

Reference strain equivalent

About this gene

This gene has 10 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_CASTEiJ_T0025170.1	-	2013	371aa	MGP_CASTEiJ_P0025170	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35946	E9Q7D8 G3UYM5 P57722	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CASTEiJ_T0025173.1	-	2544	370aa	MGP_CASTEiJ_P0025173	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0025172.1	-	1748	371aa	MGP_CASTEiJ_P0025172	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0025175.1	-	605	160aa	MGP_CASTEiJ_P0025175	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0025177.1	-	944	226aa	MGP_CASTEiJ_P0025177	Nonsense mediated decay		-	-
MGP_CASTEiJ_T0025171.1	-	1736	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_CASTEiJ_T0025174.1	-	1095	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_CASTEiJ_T0025178.1	-	717	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_CASTEiJ_T0025179.1	-	337	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_CASTEiJ_T0025176.1	-	1476	394aa	MGP_CASTEiJ_P0025176	Unknown likely coding		-	-

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Summary

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