Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Prpf18 MGP_C57BL6NJ_G0025729

.

Description

pre-mRNA processing factor 18 [Source:MGI Symbol;Acc:MGI:1914479]

Gene Synonyms

2810441A10Rik, Prp18

Location

Chromosome 2: 1,687,846-1,720,543 reverse strand.

C57BL_6NJ_v1:CM004216.1

Reference strain equivalent

About this gene

This gene has 7 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0052812.1	-	3522	342aa	MGP_C57BL6NJ_P0052812	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS15657	A0A0A6YW97 Q8BM39	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0052814.1	-	1579	342aa	MGP_C57BL6NJ_P0052814	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0052816.1	-	553	73aa	MGP_C57BL6NJ_P0052816	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0052813.1	-	3293	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0052817.1	-	551	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0052818.1	-	496	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0052815.1	-	1056	351aa	MGP_C57BL6NJ_P0052815	Unknown likely coding		-	-

.

Summary

.

.