Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Pcca MGP_C57BL6NJ_G0022080

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Description

propionyl-Coenzyme A carboxylase, alpha polypeptide [Source:MGI Symbol;Acc:MGI:97499]

Gene Synonyms

C79630

Location

Chromosome 14: 125,066,588-125,456,764 forward strand.

C57BL_6NJ_v1:CM004228.1

Reference strain equivalent

About this gene

This gene has 13 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
MGP_C57BL6NJ_T0040843.1	-	2592	724aa	MGP_C57BL6NJ_P0040843	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0040851.1	-	514	85aa	MGP_C57BL6NJ_P0040851	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-
MGP_C57BL6NJ_T0040844.1	-	512	163aa	MGP_C57BL6NJ_P0040844	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-
MGP_C57BL6NJ_T0040842.1	-	431	131aa	MGP_C57BL6NJ_P0040842	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-
MGP_C57BL6NJ_T0040848.1	-	1268	166aa	MGP_C57BL6NJ_P0040848	Nonsense mediated decay		-
MGP_C57BL6NJ_T0040845.1	-	967	182aa	MGP_C57BL6NJ_P0040845	Nonsense mediated decay		-
MGP_C57BL6NJ_T0040847.1	-	322	34aa	MGP_C57BL6NJ_P0040847	Nonsense mediated decay		-
MGP_C57BL6NJ_T0040853.1	-	1894	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-
MGP_C57BL6NJ_T0040846.1	-	534	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-
MGP_C57BL6NJ_T0040849.1	-	287	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-
MGP_C57BL6NJ_T0040841.1	-	692	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-
MGP_C57BL6NJ_T0040850.1	-	604	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-
MGP_C57BL6NJ_T0040854.1	-	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-

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Summary

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