Description
splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
Gene Synonyms
BBP, CW17R, MZFM, WBP4, Zfp162
Location
Chromosome 19: 3,347,357-3,361,729 forward strand.
C3H_HeJ_v1:CM004253.1
Reference strain equivalent
About this gene
This gene has 15 transcripts (splice variants).
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|---|
| MGP_C3HHeJ_T0050457.1 | - | 4353 | 639aa | MGP_C3HHeJ_P0050457 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS50368, CCDS50369 | D3YVH4 D3YZC9 D3YZD0 D6RDB7 E9Q4Q2 F6SRV1 F6YR19 F6Z9W2 F8WHF9 Q3UI45 Q64213 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, |
| MGP_C3HHeJ_T0050458.1 | - | 2863 | 571aa | MGP_C3HHeJ_P0050458 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_C3HHeJ_T0050462.1 | - | 2649 | 548aa | MGP_C3HHeJ_P0050462 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_C3HHeJ_T0050459.1 | - | 2282 | 638aa | MGP_C3HHeJ_P0050459 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_C3HHeJ_T0050465.1 | - | 1000 | 267aa | MGP_C3HHeJ_P0050465 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_C3HHeJ_T0050469.1 | - | 905 | 224aa | MGP_C3HHeJ_P0050469 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_C3HHeJ_T0050470.1 | - | 755 | 200aa | MGP_C3HHeJ_P0050470 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_C3HHeJ_T0050471.1 | - | 513 | 170aa | MGP_C3HHeJ_P0050471 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_C3HHeJ_T0050461.1 | - | 3221 | 110aa | MGP_C3HHeJ_P0050461 | Nonsense mediated decay | - | - | |
| MGP_C3HHeJ_T0050464.1 | - | 718 | 84aa | MGP_C3HHeJ_P0050464 | Nonsense mediated decay | - | - | |
| MGP_C3HHeJ_T0050466.1 | - | 455 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | |
| MGP_C3HHeJ_T0050463.1 | - | 869 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_C3HHeJ_T0050467.1 | - | 785 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_C3HHeJ_T0050460.1 | - | 489 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_C3HHeJ_T0050468.1 | - | 408 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - |
