Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
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Supporting evidence
ID History
- Gene history

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Gene: Secisbp2 MGP_C3HHeJ_G0020301

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Description

SECIS binding protein 2 [Source:MGI Symbol;Acc:MGI:1922670]

Gene Synonyms

2210413N07Rik, 2810012K13Rik, SBP2

Location

Chromosome 13: 50,305,823-50,340,755 forward strand.

C3H_HeJ_v1:CM004247.1

Reference strain equivalent

About this gene

This gene has 6 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C3HHeJ_T0036715.1	-	3328	858aa	MGP_C3HHeJ_P0036715	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36665	Q3U1C4 Q8BYU9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C3HHeJ_T0036716.1	-	1915	414aa	MGP_C3HHeJ_P0036716	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C3HHeJ_T0036717.1	-	604	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C3HHeJ_T0036718.1	-	556	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C3HHeJ_T0036720.1	-	784	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C3HHeJ_T0036719.1	-	751	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Summary

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