Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Zfr MGP_AKRJ_G0021672

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Description

zinc finger RNA binding protein [Source:MGI Symbol;Acc:MGI:1341890]

Gene Synonyms

C920030H05Rik

Location

Chromosome 15: 9,290,720-9,362,132 forward strand.

AKR_J_v1:CM003988.1

Reference strain equivalent

About this gene

This gene has 9 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_AKRJ_T0040554.1	-	4850	1074aa	MGP_AKRJ_P0040554	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37044	D3Z5G4 D3Z7V6 F6QJP7 F6RTK9 F6V459 O88532	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_AKRJ_T0040559.1	-	897	298aa	MGP_AKRJ_P0040559	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_AKRJ_T0040555.1	-	812	247aa	MGP_AKRJ_P0040555	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_AKRJ_T0040556.1	-	707	206aa	MGP_AKRJ_P0040556	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_AKRJ_T0040560.1	-	939	43aa	MGP_AKRJ_P0040560	Nonsense mediated decay		-	-
MGP_AKRJ_T0040558.1	-	565	114aa	MGP_AKRJ_P0040558	Nonsense mediated decay		-	-
MGP_AKRJ_T0040562.1	-	863	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_AKRJ_T0040557.1	-	513	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_AKRJ_T0040561.1	-	666	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Summary

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