Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Ddx47 MGP_AJ_G0031388

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Description

DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Source:MGI Symbol;Acc:MGI:1915005]

Gene Synonyms

4930588A18Rik, C77285

Location

Chromosome 6: 133,843,943-133,856,049 forward strand.

A_J_v1:CM003959.1

Reference strain equivalent

About this gene

This gene has 12 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_AJ_T0080684.1	-	1764	455aa	MGP_AJ_P0080684	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20643	A0A0N4SV55 A0A0N4SVK2 A0A0N4SVT1 A0A0N4SWC5 D3YWF9 F6QKD2 Q4VBG1 Q9CWX9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_AJ_T0080695.1	-	3088	61aa	MGP_AJ_P0080695	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_AJ_T0080691.1	-	1139	379aa	MGP_AJ_P0080691	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_AJ_T0080692.1	-	1078	359aa	MGP_AJ_P0080692	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_AJ_T0080686.1	-	607	196aa	MGP_AJ_P0080686	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_AJ_T0080689.1	-	551	180aa	MGP_AJ_P0080689	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_AJ_T0080685.1	-	435	138aa	MGP_AJ_P0080685	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_AJ_T0080693.1	-	693	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_AJ_T0080688.1	-	4017	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_AJ_T0080687.1	-	978	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_AJ_T0080694.1	-	791	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_AJ_T0080690.1	-	620	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Summary

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