Description
strawberry notch homolog 1 (Drosophila) [Source:MGI Symbol;Acc:MGI:2384298]
Gene Synonyms
9330180L10Rik, AI849128, AW557836, BC021875, Sbno, mSno1, sno
Location
Chromosome 5: 122,840,589-122,899,614 reverse strand.
A_J_v1:CM003958.1
Reference strain equivalent
About this gene
This gene has 18 transcripts (splice variants).
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|---|
| MGP_AJ_T0074497.1 | - | 10161 | 1391aa | MGP_AJ_P0074497 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, | |
| MGP_AJ_T0074496.1 | - | 10071 | 1391aa | MGP_AJ_P0074496 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS39280 | A0A0G2JDL6 A0A0G2JEM3 A0A0G2JF11 A0A0G2JFU7 A0A0G2JG63 A0A0G2JGC7 A0A0G2JGI0 B2RRI2 F7CVW0 Q3TMM7 | - |
| MGP_AJ_T0074498.1 | - | 4170 | 1390aa | MGP_AJ_P0074498 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_AJ_T0074505.1 | - | 2511 | 785aa | MGP_AJ_P0074505 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_AJ_T0074503.1 | - | 2413 | 755aa | MGP_AJ_P0074503 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_AJ_T0074507.1 | - | 2100 | 663aa | MGP_AJ_P0074507 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_AJ_T0074510.1 | - | 772 | 211aa | MGP_AJ_P0074510 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_AJ_T0074511.1 | - | 599 | 133aa | MGP_AJ_P0074511 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_AJ_T0074512.1 | - | 353 | 92aa | MGP_AJ_P0074512 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_AJ_T0074508.1 | - | 5293 | 263aa | MGP_AJ_P0074508 | Nonsense mediated decay | - | - | |
| MGP_AJ_T0074509.1 | - | 1224 | 241aa | MGP_AJ_P0074509 | Nonsense mediated decay | - | - | |
| MGP_AJ_T0074513.1 | - | 2025 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_AJ_T0074502.1 | - | 1512 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_AJ_T0074506.1 | - | 1189 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_AJ_T0074499.1 | - | 1061 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_AJ_T0074500.1 | - | 972 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_AJ_T0074501.1 | - | 652 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_AJ_T0074504.1 | - | 599 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - |
