Ensembl mirror
More ▼
Search »
Mouse NZO/HlLtJ (NZO_HlLtJ_v1) ▼

Favourite species

All species

Recent locations

Transcript-based displays

Configure this page

Custom tracks

Export data

Bookmark this page

Transcript: MGP_NZOHlLtJ_T0037873.1

Description

patched 1 [Source:MGI Symbol;Acc:MGI:105373]

Gene Synonyms

A230106A15Rik, PTCHGN, Patched 1, Ptc, Ptc1, Ptch, mes, patched c isoform, patched eGN isoform

Location

Chromosome 13: 62,539,242-62,585,590 reverse strand.

Reference strain equivalent

Ptch1

About this transcript

This transcript has 20 exons and maps to 163 oligo probes.

Gene

This transcript is a product of gene MGP_NZOHlLtJ_G0021100.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_NZOHlLtJ_T0037870.1-70911434aaMGP_NZOHlLtJ_P0037870
 
Protein coding
CCDS26592A0A0A6YVW7 A0A0A6YVX7 A0A0A6YWC4
A0A0A6YWZ4 Q5R1U4 Q61115
Ensembl Canonical
MGP_NZOHlLtJ_T0037876.1-1123326aaMGP_NZOHlLtJ_P0037876
 
Protein coding
--
MGP_NZOHlLtJ_T0037874.1-849174aaMGP_NZOHlLtJ_P0037874
 
Protein coding
--
MGP_NZOHlLtJ_T0037875.1-809174aaMGP_NZOHlLtJ_P0037875
 
Protein coding
--
MGP_NZOHlLtJ_T0037871.1-7655581aaMGP_NZOHlLtJ_P0037871
 
Nonsense mediated decay
--
MGP_NZOHlLtJ_T0037873.1-3418426aaMGP_NZOHlLtJ_P0037873
 
Nonsense mediated decay
--
MGP_NZOHlLtJ_T0037872.1-305No protein-
 
Retained intron
--

Summary

Statistics

Exons: 20, Coding exons: 11, Transcript length: 3,418 bps, Translation length: 426 residues

Version

MGP_NZOHlLtJ_T0037873.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.