Transcript: MGP_NODShiLtJ_T0090378.1

Description

zinc finger CCCH-type containing 18 [Source:MGI Symbol;Acc:MGI:1923264]

Gene Synonyms

1190001B23Rik, 5830416A07Rik, Nhn1

Location

Chromosome 8: 137,080,820-137,093,921 forward strand.

Reference strain equivalent

Zc3h18

About this transcript

This transcript has 4 exons and maps to 78 oligo probes.

Gene

This transcript is a product of gene MGP_NODShiLtJ_G0034026.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_NODShiLtJ_T0090375.1	-	3810	972aa	MGP_NODShiLtJ_P0090375	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS22735, CCDS22736, CCDS80941	G3X8T2 H3BIW0 H3BJJ9 H3BKL4 Q0P678	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_NODShiLtJ_T0090376.1	-	3705	948aa	MGP_NODShiLtJ_P0090376	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0090379.1	-	3672	950aa	MGP_NODShiLtJ_P0090379	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0090384.1	-	837	240aa	MGP_NODShiLtJ_P0090384	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0090381.1	-	518	172aa	MGP_NODShiLtJ_P0090381	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0090377.1	-	512	104aa	MGP_NODShiLtJ_P0090377	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0090380.1	-	492	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_NODShiLtJ_T0090382.1	-	4789	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0090378.1	-	2895	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0090383.1	-	375	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,895 bps,

Version

MGP_NODShiLtJ_T0090378.1

Type

Retained intron

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_NODShiLtJ_T0090378.1

Summary

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Transcript: MGP_NODShiLtJ_T0090378.1

Summary

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