Transcript: MGP_NODShiLtJ_T0031298.1

Description

benzodiazepine receptor associated protein 1 [Source:MGI Symbol;Acc:MGI:2450877]

Gene Synonyms

D230016K05, PRAX-1, Tspoap1, mKIAA0612, peripheral

Location

Chromosome 11: 96,017,638-96,042,991 forward strand.

Reference strain equivalent

Tspoap1

About this transcript

This transcript has 32 exons, is annotated with 64 domains and features and maps to 306 oligo probes.

Gene

This transcript is a product of gene MGP_NODShiLtJ_G0018760.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_NODShiLtJ_T0031298.1	-	7607	1846aa	MGP_NODShiLtJ_P0031298	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48879	F6WV49 F7AUI0 F7CD74 Q5NCP6 Q7TNF8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_NODShiLtJ_T0031299.1	-	7379	1786aa	MGP_NODShiLtJ_P0031299	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0031302.1	-	2367	383aa	MGP_NODShiLtJ_P0031302	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0031301.1	-	752	250aa	MGP_NODShiLtJ_P0031301	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0031306.1	-	506	168aa	MGP_NODShiLtJ_P0031306	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0031300.1	-	386	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_NODShiLtJ_T0031303.1	-	3512	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0031304.1	-	2697	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0031307.1	-	730	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0031305.1	-	714	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 32, Coding exons: 31, Transcript length: 7,607 bps, Translation length: 1,846 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7TNF8

CCDS

This transcript is a member of the Mouse NOD/ShiLtJ CCDS set: CCDS48879

Version

MGP_NODShiLtJ_T0031298.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_NODShiLtJ_T0031298.1

Summary

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Transcript: MGP_NODShiLtJ_T0031298.1

Summary

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