Transcript: MGP_NODShiLtJ_T0026474.1

Description

synapsin III [Source:MGI Symbol;Acc:MGI:1351334]

Gene Synonyms

Synapsin IIIa

Location

Chromosome 10: 95,305,399-95,759,729 reverse strand.

Reference strain equivalent

Syn3

About this transcript

This transcript has 14 exons, is annotated with 28 domains and features and maps to 188 oligo probes.

Gene

This transcript is a product of gene MGP_NODShiLtJ_G0017471.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_NODShiLtJ_T0026474.1	-	2360	579aa	MGP_NODShiLtJ_P0026474	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS24096, CCDS48659	D3Z620 Q8JZP2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_NODShiLtJ_T0026477.1	-	3966	243aa	MGP_NODShiLtJ_P0026477	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0026475.1	-	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_NODShiLtJ_T0026482.1	-	4777	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0026476.1	-	4003	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0026483.1	-	1442	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 2,360 bps, Translation length: 579 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8JZP2

CCDS

This transcript is a member of the Mouse NOD/ShiLtJ CCDS set: CCDS24096, CCDS48659

Version

MGP_NODShiLtJ_T0026474.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_NODShiLtJ_T0026474.1

Summary

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Transcript: MGP_NODShiLtJ_T0026474.1

Summary

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