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Transcript: MGP_LPJ_T0028104.1

Description

VPS54 GARP complex subunit [Source:MGI Symbol;Acc:MGI:2178798]

Gene Synonyms

5330404P15Rik, Hcc8, Vps54l, mSLP8, wr

Location

Chromosome 11: 18,983,206-19,069,962 forward strand.

Reference strain equivalent

Vps54

About this transcript

This transcript has 23 exons, is annotated with 11 domains and features and maps to 317 oligo probes.

Gene

This transcript is a product of gene MGP_LPJ_G0017981.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_LPJ_T0028105.1-4441977aaMGP_LPJ_P0028105
 
Protein coding
-Ensembl Canonical
MGP_LPJ_T0028104.1-4391965aaMGP_LPJ_P0028104
 
Protein coding
CCDS24463, CCDS70147Q5SPW0 Q5SRW8 -
MGP_LPJ_T0028106.1-2914815aaMGP_LPJ_P0028106
 
Protein coding
--
MGP_LPJ_T0028110.1-3596No protein-
 
Processed transcript
--
MGP_LPJ_T0028109.1-624No protein-
 
Processed transcript
--
MGP_LPJ_T0028108.1-623No protein-
 
Processed transcript
--
MGP_LPJ_T0028107.1-493No protein-
 
Processed transcript
--

Summary

Statistics

Exons: 23, Coding exons: 22, Transcript length: 4,391 bps, Translation length: 965 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5SPW0

CCDS

This transcript is a member of the Mouse LP/J CCDS set: CCDS24463, CCDS70147

Version

MGP_LPJ_T0028104.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.