Transcript: MGP_C57BL6NJ_T0089496.1

Description

palladin, cytoskeletal associated protein [Source:MGI Symbol;Acc:MGI:1919583]

Gene Synonyms

2410003B16Rik, 6030492A02, Kiaa0992

Location

Chromosome 8: 63,772,804-63,773,779 reverse strand.

Reference strain equivalent

Palld

About this transcript

This transcript has 2 exons and maps to 84 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0034131.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0089493.1	-	4536	1408aa	MGP_C57BL6NJ_P0089493	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS40350, CCDS80880, CCDS80881, CCDS80882	D3Z1J5 Q9ET54	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0089495.1	-	3626	1002aa	MGP_C57BL6NJ_P0089495	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0089497.1	-	3566	1113aa	MGP_C57BL6NJ_P0089497	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0089494.1	-	2378	663aa	MGP_C57BL6NJ_P0089494	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0089498.1	-	1325	336aa	MGP_C57BL6NJ_P0089498	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0089500.1	-	2570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0089501.1	-	2487	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0089499.1	-	680	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0089496.1	-	444	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 444 bps,

Version

MGP_C57BL6NJ_T0089496.1

Type

Retained intron

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0089496.1

Summary

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Transcript: MGP_C57BL6NJ_T0089496.1

Summary

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