Transcript: MGP_C57BL6NJ_T0071517.1

Description

C-terminal binding protein 1 [Source:MGI Symbol;Acc:MGI:1201685]

Gene Synonyms

BARS, CtBP1-L, CtBP1-S, CtBP3/BARS, D4S115h, D5H4S115, D5H4S115E

Location

Chromosome 5: 33,300,620-33,327,068 reverse strand.

Reference strain equivalent

Ctbp1

About this transcript

This transcript has 10 exons, is annotated with 13 domains and features and maps to 160 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0029874.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0071512.1	-	2279	441aa	MGP_C57BL6NJ_P0071512	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19201, CCDS80255, CCDS80256	A0A0J9YTW3 A0A0J9YU62 A0A0J9YU66 A0A0J9YUM4 A0A0J9YUR5 A0A0J9YVC3 A0A0J9YVI3 O88712	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0071514.1	-	3595	337aa	MGP_C57BL6NJ_P0071514	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0071513.1	-	2436	429aa	MGP_C57BL6NJ_P0071513	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0071517.1	-	1649	430aa	MGP_C57BL6NJ_P0071517	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0071519.1	-	768	180aa	MGP_C57BL6NJ_P0071519	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0071520.1	-	539	117aa	MGP_C57BL6NJ_P0071520	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0071523.1	-	477	31aa	MGP_C57BL6NJ_P0071523	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0071522.1	-	474	85aa	MGP_C57BL6NJ_P0071522	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0071518.1	-	743	77aa	MGP_C57BL6NJ_P0071518	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0071516.1	-	873	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0071521.1	-	749	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0071515.1	-	660	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,649 bps, Translation length: 430 residues

Version

MGP_C57BL6NJ_T0071517.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0071517.1

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: MGP_C57BL6NJ_T0071517.1

Summary

About Us

Get help

Our sister sites

Follow us