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Transcript: MGP_C57BL6NJ_T0050078.1

Description

sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:MGI Symbol;Acc:MGI:1203727]

Gene Synonyms

A730020P05Rik, AI851735, Sema6A-1, Semaq, VIa, sema

Location

Chromosome 18: 47,719,576-47,842,386 reverse strand.

Reference strain equivalent

Sema6a

About this transcript

This transcript has 20 exons, is annotated with 18 domains and features and maps to 283 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0024828.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0050078.1-43391048aaMGP_C57BL6NJ_P0050078
 
Protein coding
-Ensembl Canonical
MGP_C57BL6NJ_T0050076.1-69231041aaMGP_C57BL6NJ_P0050076
 
Protein coding
--
MGP_C57BL6NJ_T0050075.1-68561031aaMGP_C57BL6NJ_P0050075
 
Protein coding
--
MGP_C57BL6NJ_T0050077.1-4123976aaMGP_C57BL6NJ_P0050077
 
Protein coding
--
MGP_C57BL6NJ_T0050079.1-32911031aaMGP_C57BL6NJ_P0050079
 
Protein coding
--
MGP_C57BL6NJ_T0050082.1-740216aaMGP_C57BL6NJ_P0050082
 
Protein coding
--
MGP_C57BL6NJ_T0050074.1-652110aaMGP_C57BL6NJ_P0050074
 
Protein coding
CCDS37813, CCDS79642D3YWM8 D3YZJ8 F6WLW8
K3W4S5 O35464 		-
MGP_C57BL6NJ_T0050081.1-3328No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0050080.1-3225No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0050083.1-717No protein-
 
Retained intron
--

Summary

Statistics

Exons: 20, Coding exons: 19, Transcript length: 4,339 bps, Translation length: 1,048 residues

Version

MGP_C57BL6NJ_T0050078.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.