Transcript: MGP_C57BL6NJ_T0026323.1

Description

adenosine deaminase, RNA-specific, B1 [Source:MGI Symbol;Acc:MGI:891999]

Gene Synonyms

1700057H01Rik, ADAR2, AW124433, AW558573, Adar2, BB220382, D10Bwg0447e, RED1, Red1

Location

Chromosome 10: 80,321,350-80,453,769 reverse strand.

Reference strain equivalent

Adarb1

About this transcript

This transcript has 12 exons and maps to 292 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0017791.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0026324.1	-	6662	711aa	MGP_C57BL6NJ_P0026324	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0026319.1	-	6584	711aa	MGP_C57BL6NJ_P0026319	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35948, CCDS35949	D6RDS5 D6RGS1 Q91ZS8	-
MGP_C57BL6NJ_T0026320.1	-	6549	701aa	MGP_C57BL6NJ_P0026320	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0026321.1	-	6630	82aa	MGP_C57BL6NJ_P0026321	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0026323.1	-	6583	38aa	MGP_C57BL6NJ_P0026323	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0026322.1	-	6557	82aa	MGP_C57BL6NJ_P0026322	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0026327.1	-	3289	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0026325.1	-	2584	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0026326.1	-	2577	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0026329.1	-	704	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0026328.1	-	670	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0026331.1	-	451	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0026330.1	-	383	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 12, Coding exons: 3, Transcript length: 6,583 bps, Translation length: 38 residues

Version

MGP_C57BL6NJ_T0026323.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0026323.1

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: MGP_C57BL6NJ_T0026323.1

Summary

About Us

Get help

Our sister sites

Follow us