Transcript: MGP_C3HHeJ_T0070754.1

Description

Wolf-Hirschhorn syndrome candidate 1 (human) [Source:MGI Symbol;Acc:MGI:1276574]

Gene Synonyms

5830445G22Rik, 9430010A17Rik, AW555663, C130020C13Rik, D030027O06Rik, D930023B08Rik, Kiaa1090, MMSET, NSD2, Nsd2, Whsc1l, mKIAA1090

Location

Chromosome 5: 32,236,232-32,290,309 forward strand.

Reference strain equivalent

Nsd2

About this transcript

This transcript has 21 exons and maps to 411 oligo probes.

Gene

This transcript is a product of gene MGP_C3HHeJ_G0029153.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C3HHeJ_T0070748.1	-	6989	1366aa	MGP_C3HHeJ_P0070748	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C3HHeJ_T0070751.1	-	7781	647aa	MGP_C3HHeJ_P0070751	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C3HHeJ_T0070749.1	-	6919	1366aa	MGP_C3HHeJ_P0070749	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C3HHeJ_T0070755.1	-	6318	166aa	MGP_C3HHeJ_P0070755	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C3HHeJ_T0070747.1	-	5602	629aa	MGP_C3HHeJ_P0070747	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS51467, CCDS51468	A0A0J9YUM7 D3Z229 D3Z3E0 D3Z3E4 F6S6G6 F6Y765 Q8BVE8	-
MGP_C3HHeJ_T0070753.1	-	4633	1365aa	MGP_C3HHeJ_P0070753	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C3HHeJ_T0070750.1	-	7153	647aa	MGP_C3HHeJ_P0070750	Nonsense mediated decay		-	-
MGP_C3HHeJ_T0070752.1	-	7020	647aa	MGP_C3HHeJ_P0070752	Nonsense mediated decay		-	-
MGP_C3HHeJ_T0070754.1	-	4473	533aa	MGP_C3HHeJ_P0070754	Nonsense mediated decay		-	-
MGP_C3HHeJ_T0070757.1	-	2269	272aa	MGP_C3HHeJ_P0070757	Nonsense mediated decay		-	-
MGP_C3HHeJ_T0070756.1	-	1002	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C3HHeJ_T0070759.1	-	606	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C3HHeJ_T0070760.1	-	537	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C3HHeJ_T0070758.1	-	454	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 21, Coding exons: 7, Transcript length: 4,473 bps, Translation length: 533 residues

Version

MGP_C3HHeJ_T0070754.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C3HHeJ_T0070754.1

Summary

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Transcript: MGP_C3HHeJ_T0070754.1

Summary

About Us

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