Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Xrn1 MGP_BALBcJ_G0035114

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Description

5'-3' exoribonuclease 1 [Source:MGI Symbol;Acc:MGI:891964]

Gene Synonyms

Dhm2, exo, mXrn1

Location

Chromosome 9: 93,424,497-93,527,787 forward strand.

BALB_cJ_v1:CM004202.1

Reference strain equivalent

About this gene

This gene has 9 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0093692.1	-	5463	1711aa	MGP_BALBcJ_P0093692	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS40728, CCDS81053	A0A087WNV6 A0A087WQ18 A0A087WQN7 F8VQ87	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0093693.1	-	10169	1707aa	MGP_BALBcJ_P0093693	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0093697.1	-	3093	969aa	MGP_BALBcJ_P0093697	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0093694.1	-	357	40aa	MGP_BALBcJ_P0093694	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0093696.1	-	6199	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0093698.1	-	3615	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0093695.1	-	3357	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0093700.1	-	3046	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0093699.1	-	844	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Summary

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