Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Hnrnpd MGP_129S1SvImJ_G0029780

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Description

heterogeneous nuclear ribonucleoprotein D [Source:MGI Symbol;Acc:MGI:101947]

Gene Synonyms

Auf1, Hnrpd

Location

Chromosome 5: 101,404,520-101,427,356 reverse strand.

129S1_SvImJ_v1:CM003938.1

Reference strain equivalent

About this gene

This gene has 9 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_129S1SvImJ_T0072783.1	-	6697	327aa	MGP_129S1SvImJ_P0072783	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS39180, CCDS39181, CCDS39182, CCDS51571	A0A0G2JFL4 E9Q4W5 E9Q5B6 F6SHF3 F6ZV59 F7A465 G3X9W0 G5E8G0 Q60668	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_129S1SvImJ_T0072784.1	-	1982	300aa	MGP_129S1SvImJ_P0072784	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_129S1SvImJ_T0072785.1	-	1586	308aa	MGP_129S1SvImJ_P0072785	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_129S1SvImJ_T0072786.1	-	1453	259aa	MGP_129S1SvImJ_P0072786	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_129S1SvImJ_T0072787.1	-	1117	215aa	MGP_129S1SvImJ_P0072787	Nonsense mediated decay		-	-
MGP_129S1SvImJ_T0072790.1	-	1020	58aa	MGP_129S1SvImJ_P0072790	Nonsense mediated decay		-	-
MGP_129S1SvImJ_T0072788.1	-	737	150aa	MGP_129S1SvImJ_P0072788	Nonsense mediated decay		-	-
MGP_129S1SvImJ_T0072789.1	-	699	131aa	MGP_129S1SvImJ_P0072789	Nonsense mediated decay		-	-
MGP_129S1SvImJ_T0072791.1	-	425	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Summary

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