Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Rbm47 MGP_129S1SvImJ_G0029587

.

Description

RNA binding motif protein 47 [Source:MGI Symbol;Acc:MGI:2384294]

Gene Synonyms

9530077J19Rik

Location

Chromosome 5: 65,720,066-65,888,427 reverse strand.

129S1_SvImJ_v1:CM003938.1

Reference strain equivalent

About this gene

This gene has 14 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_129S1SvImJ_T0071889.1	-	5512	590aa	MGP_129S1SvImJ_P0071889	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_129S1SvImJ_T0071888.1	-	5205	590aa	MGP_129S1SvImJ_P0071888	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_129S1SvImJ_T0071890.1	-	4889	590aa	MGP_129S1SvImJ_P0071890	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_129S1SvImJ_T0071887.1	-	4697	590aa	MGP_129S1SvImJ_P0071887	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19313, CCDS71598	D3YXZ5 D3Z113 D3Z5E3 Q91WT8	-
MGP_129S1SvImJ_T0071892.1	-	3031	590aa	MGP_129S1SvImJ_P0071892	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_129S1SvImJ_T0071891.1	-	2824	521aa	MGP_129S1SvImJ_P0071891	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_129S1SvImJ_T0071893.1	-	2186	590aa	MGP_129S1SvImJ_P0071893	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_129S1SvImJ_T0071895.1	-	703	158aa	MGP_129S1SvImJ_P0071895	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_129S1SvImJ_T0071898.1	-	530	6aa	MGP_129S1SvImJ_P0071898	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_129S1SvImJ_T0071897.1	-	332	13aa	MGP_129S1SvImJ_P0071897	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_129S1SvImJ_T0071896.1	-	504	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_129S1SvImJ_T0071900.1	-	464	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_129S1SvImJ_T0071899.1	-	452	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_129S1SvImJ_T0071894.1	-	2398	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

.

Summary

.

.