Transcript: ENSMUST00000221550.2 Gm45949-201

Description

predicted gene, 45949 [Source:MGI Symbol;Acc:MGI:5825586]

Location

Chromosome 13: 46,214,073-46,222,238 forward strand.

About this transcript

This transcript has 7 exons, is associated with 707 variant alleles and maps to 26 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000113860.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000261964.1	Gm45949-203	1522	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000261966.1	Gm45949-205	2123	No protein	-	lncRNA	-
ENSMUST00000261967.1	Gm45949-206	2035	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000261965.1	Gm45949-204	1999	No protein	-	lncRNA	-
ENSMUST00000261974.1	Gm45949-213	1929	No protein	-	lncRNA	-
ENSMUST00000221550.2	Gm45949-201	1895	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000261978.1	Gm45949-217	1844	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000261972.1	Gm45949-211	1833	No protein	-	lncRNA	-
ENSMUST00000261975.1	Gm45949-214	1801	No protein	-	lncRNA	-
ENSMUST00000222657.3	Gm45949-202	1772	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000261971.1	Gm45949-210	1686	No protein	-	lncRNA	-
ENSMUST00000261973.1	Gm45949-212	1665	No protein	-	lncRNA	-
ENSMUST00000261977.1	Gm45949-216	1648	No protein	-	lncRNA	-
ENSMUST00000261979.1	Gm45949-218	1368	No protein	-	lncRNA	-
ENSMUST00000261976.1	Gm45949-215	1297	No protein	-	lncRNA	-
ENSMUST00000261968.1	Gm45949-207	708	No protein	-	lncRNA	-
ENSMUST00000261970.1	Gm45949-209	698	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000261969.1	Gm45949-208	647	No protein	-	lncRNA	-
ENSMUST00000261980.1	Gm45949-219	398	No protein	-	lncRNA	-
ENSMUST00000261981.1	Gm45949-220	289	No protein	-	lncRNA	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 1,895 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000221550.2

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000221550.2 Gm45949-201

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Transcript: ENSMUST00000221550.2 Gm45949-201

Summary

About Us

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