Transcript: ENSMUST00000181124.3 1700125G22Rik-201

Description

RIKEN cDNA 1700125G22 gene [Source:MGI Symbol;Acc:MGI:1923907]

Location

Chromosome 3: 27,208,163-27,211,170 forward strand.

About this transcript

This transcript has 3 exons, is associated with 752 variant alleles and maps to 42 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000097584.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000313896.1	1700125G22Rik-203	672	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000313904.1	1700125G22Rik-211	1307	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000313910.1	1700125G22Rik-217	1292	No protein	-	lncRNA	-
ENSMUST00000313903.1	1700125G22Rik-210	1168	No protein	-	lncRNA	-
ENSMUST00000242382.2	1700125G22Rik-202	1164	No protein	-	lncRNA	-
ENSMUST00000181124.3	1700125G22Rik-201	875	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000313908.1	1700125G22Rik-215	871	No protein	-	lncRNA	-
ENSMUST00000313905.1	1700125G22Rik-212	815	No protein	-	lncRNA	-
ENSMUST00000313909.1	1700125G22Rik-216	803	No protein	-	lncRNA	-
ENSMUST00000313898.1	1700125G22Rik-205	748	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000313900.1	1700125G22Rik-207	744	No protein	-	lncRNA	-
ENSMUST00000313906.1	1700125G22Rik-213	734	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000313901.1	1700125G22Rik-208	677	No protein	-	lncRNA	-
ENSMUST00000313897.1	1700125G22Rik-204	664	No protein	-	lncRNA	-
ENSMUST00000313911.1	1700125G22Rik-218	619	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000313902.1	1700125G22Rik-209	598	No protein	-	lncRNA	-
ENSMUST00000313899.1	1700125G22Rik-206	545	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000313912.1	1700125G22Rik-219	527	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000313907.1	1700125G22Rik-214	463	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 875 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000181124.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENSMUST00000181124.3 1700125G22Rik-201

Summary

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Transcript: ENSMUST00000181124.3 1700125G22Rik-201

Summary

About Us

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